Bioinformatics/Proteomics Research Group FH OÖ Campus Hagenberg

You are probably looking for one of the pages below ⬇️

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Projects

Here is an overview of projects that we have published:

• MS Amanda

  MS Amanda is a scoring system to identify peptides out of tandem mass spectrometry data using a database of known proteins:

  🔗 Website

  💾 Repository

• MS Ana

  MS Ana is a scoring system to identify peptides in tandem mass spectrometry data using a library of previously identified spectra. Furthermore, MS Ana can create decoy spectral libraries for validation and run searches for additional modifications not found in the spectral library.:

  🔗 Website

• MS Annika

  MS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of cleavable and non-cleavable crosslinkers from MS2 and MS3 spectra:

  🔗 Website

  💾 Repository

• pyXLMS

  pyXLMS is a python package and web application with graphical user interface that aims to simplify and streamline the intermediate step of connecting crosslink search engine results with down-stream analysis tools:

  🔗 Website

  💾 Repository

You can find out more about us here: bioinformatics.fh-hagenberg.at

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Contact

• Website: bioinformatics.fh-hagenberg.at
• GitHub: github.com/hgb-bin-proteomics
• Mail: proteomics@fh-hagenberg.at