HGB-BIN-PROTEOMICSProteomics Research Group FH OÖ Hagenberg

We develop proteomics and bioinformatics software!

MS Amanda

MS Amanda is a scoring system to identify peptides out of tandem mass spectrometry data using a database of known proteins.

Website

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MS Ana

MS Ana is a scoring system to identify peptides in tandem mass spectrometry data using a library of previously identified spectra.

Website

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MS Annika

MS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of cleavable and non-cleavable crosslinkers from MS2 and MS3 spectra.

Website

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MS Andrea

MSAndrea is an open modification search engine that is designed to directly identify peptide modifications on the PSM level.

GitHub

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pyXLMS

pyXLMS is a python package and web application with graphical user interface that aims to simplify and streamline the intermediate step of connecting crosslink search engine results with down-stream analysis tools.

Website